SMTL ID : 2pzd.1

Crystal Structure of the HtrA2/Omi PDZ Domain Bound to a Phage-Derived Ligand (WTMFWV)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: R.5, R.6, Y.74, R.78 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.6, A:R.6 EDO.2: 3 residues within 4Å: Chain A: F.111 Chain B: E.71, Y.74 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structural and functional analysis of the ligand specificity of the HtrA2/Omi PDZ domain. Protein Sci. (2007)

Release Date

2007-08-07

Peptides

Serine protease HTRA2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine protease HTRA2