- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.33 Å
- Oligo State
- homo-hexamer
- Ligands
- 7 x CA: CALCIUM ION(Non-covalent)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.3: 3 residues within 4Å:- Chain A: A.31, H.49, E.50
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:H.49
EDO.4: 7 residues within 4Å:- Chain A: A.41, F.42, I.101, E.135, H.139, W.140, Y.152
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.152, A:Y.152
EDO.5: 8 residues within 4Å:- Chain A: F.167, P.169, T.170, I.175, P.179, N.181
- Chain C: Y.137, H.178
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain A- Hydrogen bonds: C:Y.137, A:T.170, A:N.181
EDO.9: 7 residues within 4Å:- Chain C: D.171, R.205, R.206, R.207, F.208
- Chain D: Y.137, W.138
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:R.207, C:F.208
EDO.11: 6 residues within 4Å:- Chain D: K.5, E.60, R.62, L.96, M.126, Y.129
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:F.3, D:E.60, D:R.62
EDO.12: 5 residues within 4Å:- Chain D: P.173, E.174, S.177
- Chain E: P.173, E.174
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:S.177, D:S.177
EDO.17: 1 residues within 4Å:- Chain F: Y.129
No protein-ligand interaction detected (PLIP)- 4 x ACY: ACETIC ACID(Non-functional Binders)
ACY.6: 4 residues within 4Å:- Chain A: K.34, L.35, A.46, H.49
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:H.49
- Hydrogen bonds: A:L.35
- Salt bridges: A:H.49
ACY.14: 4 residues within 4Å:- Chain E: E.60, R.62, L.96, Y.129
3 PLIP interactions:3 interactions with chain E- Hydrophobic interactions: E:E.60, E:Y.129
- Salt bridges: E:R.62
ACY.15: 6 residues within 4Å:- Chain E: L.98, G.99, T.133, T.134, E.135
- Ligands: CA.13
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:T.134, E:T.134
ACY.18: 5 residues within 4Å:- Chain F: E.89, H.198, A.201, L.202, R.205
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:E.89
- Salt bridges: F:H.198, F:R.205
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of acetoin utilization protein (ZP_00540088.1) from Exiguobacterium sibiricum 255-15 at 2.33 A resolution. To be published
- Release Date
- 2007-06-12
- Peptides
- Acetoin utilization protein: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.33 Å
- Oligo State
- homo-hexamer
- Ligands
- 7 x CA: CALCIUM ION(Non-covalent)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 4 x ACY: ACETIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of acetoin utilization protein (ZP_00540088.1) from Exiguobacterium sibiricum 255-15 at 2.33 A resolution. To be published
- Release Date
- 2007-06-12
- Peptides
- Acetoin utilization protein: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F