SMTL ID : 2q37.1

Crystal structure of OHCU decarboxylase in the presence of (S)-allantoin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x 3AL: 1-[(4S)-2,5-DIOXOIMIDAZOLIDIN-4-YL]UREA(Non-covalent)

3AL.1: 12 residues within 4Å: Chain A: H.78, P.79, Q.80, I.81, E.100, F.131, I.132, I.133, C.134, A.135, I.169, R.173 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:P.79, A:E.100, A:F.131, A:I.133, A:I.133, A:A.135, A:R.173 Water bridges: A:I.81 3AL.2: 12 residues within 4Å: Chain B: H.78, P.79, Q.80, I.81, E.100, F.131, I.132, I.133, C.134, A.135, I.169, R.173 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:H.78, B:P.79, B:E.100, B:E.100, B:F.131, B:I.133, B:I.133, B:A.135, B:R.173 Water bridges: B:I.81, B:S.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, K. et al., Structural and functional basis for (s)-allantoin formation in the ureide pathway. J.Biol.Chem. (2007)

Release Date

2007-06-12

Peptides

OHCU decarboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

OHCU decarboxylase