SMTL ID : 2q6l.1 (1 other biounit)

SalL double mutant Y70T/G131S with CLDA and L-MET

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

homo-trimer

Ligands

3 x 5CD: 5'-CHLORO-5'-DEOXYADENOSINE(Non-covalent)

5CD.1: 18 residues within 4Å: Chain A: D.13, F.47, T.72, V.73, Y.74, P.75, T.77, T.130, W.131, Y.132, S.133 Chain C: F.188, N.190, F.230, L.252, N.253, Q.254 Ligands: MET.2 10 PLIP interactions: 6 interactions with chain C, 4 interactions with chain A Hydrogen bonds: C:N.190, C:L.252, C:Q.254, A:D.13, A:D.13, A:Y.74, A:S.133 Water bridges: C:L.252 pi-Stacking: C:F.230, C:F.230 5CD.3: 18 residues within 4Å: Chain A: F.188, N.190, F.230, L.252, N.253, Q.254 Chain B: D.13, F.47, T.72, V.73, Y.74, P.75, T.77, T.130, W.131, Y.132, S.133 Ligands: MET.4 10 PLIP interactions: 4 interactions with chain B, 6 interactions with chain A Hydrogen bonds: B:D.13, B:D.13, B:Y.74, B:S.133, A:N.190, A:L.252, A:Q.254 Water bridges: A:L.252 pi-Stacking: A:F.230, A:F.230 5CD.5: 18 residues within 4Å: Chain B: F.188, N.190, F.230, L.252, N.253, Q.254 Chain C: D.13, F.47, T.72, V.73, Y.74, P.75, T.77, T.130, W.131, Y.132, S.133 Ligands: MET.6 10 PLIP interactions: 6 interactions with chain B, 4 interactions with chain C Hydrogen bonds: B:N.190, B:L.252, B:Q.254, C:D.13, C:D.13, C:Y.74, C:S.133 Water bridges: B:L.252 pi-Stacking: B:F.230, B:F.230

3 x MET: METHIONINE(Non-covalent)

MET.2: 9 residues within 4Å: Chain A: T.130 Chain C: D.185, N.190, W.192, F.230, Y.241, N.243, S.244 Ligands: 5CD.1 4 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C, 1 Ligand-Ligand interactions Hydrogen bonds: A:T.130, C:Y.241, C:S.244, M.2 MET.4: 9 residues within 4Å: Chain A: D.185, N.190, W.192, F.230, Y.241, N.243, S.244 Chain B: T.130 Ligands: 5CD.3 4 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B, 1 Ligand-Ligand interactions Hydrogen bonds: A:Y.241, A:S.244, B:T.130, M.4 MET.6: 9 residues within 4Å: Chain B: D.185, N.190, W.192, F.230, Y.241, N.243, S.244 Chain C: T.130 Ligands: 5CD.5 4 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C, 1 Ligand-Ligand interactions Hydrogen bonds: B:Y.241, B:S.244, C:T.130, M.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eustaquio, A.S. et al., Discovery and characterization of a marine bacterial SAM-dependent chlorinase. Nat.Chem.Biol. (2008)

Release Date

2007-12-11

Peptides

Hypothetical protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Hypothetical protein

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