SMTL ID : 2q6s.1

2.4 angstrom crystal structure of PPAR gamma complexed to BVT.13 without co-activator peptides

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

1 x PLB: 2-[(2,4-DICHLOROBENZOYL)AMINO]-5-(PYRIMIDIN-2-YLOXY)BENZOIC ACID(Non-covalent)

PLB.1: 19 residues within 4Å: Chain B: I.46, L.52, E.56, F.61, H.63, R.77, I.78, G.81, C.82, R.85, S.86, A.89, L.127, L.130, L.137, I.138, S.139, M.145, M.161 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:L.52, B:E.56, B:F.61, B:I.78, B:R.85, B:L.130, B:I.138 Hydrogen bonds: B:S.139 Halogen bonds: B:L.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bruning, J.B. et al., Partial Agonists Activate PPARgamma Using a Helix 12 Independent Mechanism. Structure (2007)

Release Date

2007-10-23

Peptides

Peroxisome Proliferator-Activated Receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome Proliferator-Activated Receptor gamma

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