SMTL ID : 2q7n.2 (1 other biounit)

Crystal structure of Leukemia inhibitory factor in complex with LIF receptor (domains 1-5)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.00 Å

Oligo State

hetero-1-1-mer

Ligands

4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: N.123, T.146 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 2 residues within 4Å: Chain A: S.328, N.361 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 3 residues within 4Å: Chain A: N.380, T.382, E.383 No protein-ligand interaction detected (PLIP) NAG-NAG.7: 4 residues within 4Å: Chain A: H.354, G.356, N.412, E.442 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.354

2 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.2: 1 residues within 4Å: Chain A: N.220 No protein-ligand interaction detected (PLIP) NAG-NAG-FUC.3: 2 residues within 4Å: Chain A: G.310, N.344 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- MAN- MAN- FUC: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-MAN-MAN-FUC.6: 3 residues within 4Å: Chain A: N.399, S.400, T.401 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.8: 4 residues within 4Å: Chain A: A.100, D.101, S.106, N.158 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:D.101 Hydrogen bonds: A:S.106, A:S.106, A:N.158 NAG.9: 1 residues within 4Å: Chain A: N.197 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huyton, T. et al., An unusual cytokine:Ig-domain interaction revealed in the crystal structure of leukemia inhibitory factor (LIF) in complex with the LIF receptor. Proc.Natl.Acad.Sci.USA (2007)

Release Date

2007-07-31

Peptides

Leukemia inhibitory factor receptor: A
Leukemia inhibitory factor: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Leukemia inhibitory factor receptor

Leukemia inhibitory factor

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