SMTL ID : 2q9h.1

Crystal structure of the C73S mutant of diaminopimelate epimerase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 10 residues within 4Å: Chain A: G.8, L.9, N.11, F.13, G.74, N.75, G.76, A.77, R.78, C.79 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:G.8, A:N.75, A:G.76, A:R.78, A:C.79 Water bridges: A:R.78, A:A.216 Salt bridges: A:R.78, A:R.78

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.2: 3 residues within 4Å: Chain A: Y.139, I.140, R.184 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.140 Hydrogen bonds: A:I.140 Water bridges: A:N.133 Salt bridges: A:R.184 ACY.3: 5 residues within 4Å: Chain A: P.54, E.55, D.57, K.92, S.96 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pillai, B. et al., Dynamics of catalysis revealed from the crystal structures of mutants of diaminopimelate epimerase. Biochem.Biophys.Res.Commun. (2007)

Release Date

2007-10-23

Peptides

Diaminopimelate epimerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Diaminopimelate epimerase