SMTL ID : 2qap.1

Fructose-1,6-bisphosphate aldolase from Leishmania mexicana

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

homo-tetramer

Ligands

11 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: S.301, G.302, A.332, R.333 Ligands: PO4.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.333 Water bridges: A:S.301, A:A.332, A:A.334 PO4.2: 6 residues within 4Å: Chain A: R.178, E.217, E.219, K.259, L.300 Ligands: PO4.1 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:E.219 Water bridges: A:K.176, A:K.176, A:K.176, A:R.178, A:R.178, A:S.301 Salt bridges: A:R.178, A:K.259 PO4.3: 5 residues within 4Å: Chain A: E.236, H.237, R.240 Chain D: N.35, Q.247 12 PLIP interactions: 3 interactions with chain D, 9 interactions with chain A Hydrogen bonds: D:N.35, D:Q.247, A:E.236 Water bridges: D:P.32, A:R.233, A:R.233, A:R.233, A:R.233, A:H.237, A:R.240 Salt bridges: A:H.237, A:R.240 PO4.4: 3 residues within 4Å: Chain B: G.302, A.332, R.333 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:R.333 Water bridges: B:S.301, B:S.301, B:G.302, B:G.303, B:G.303, B:A.334 PO4.5: 5 residues within 4Å: Chain B: E.236, H.237, R.240 Chain C: N.35, Q.247 8 PLIP interactions: 4 interactions with chain C, 4 interactions with chain B Hydrogen bonds: C:N.35, C:N.35, C:Q.247 Water bridges: C:P.32, B:H.237, B:R.240 Salt bridges: B:H.237, B:R.240 PO4.6: 6 residues within 4Å: Chain C: R.72, S.301, G.302, A.332, R.333 Ligands: PO4.7 10 PLIP interactions: 10 interactions with chain C Hydrogen bonds: C:S.301, C:A.332, C:R.333 Water bridges: C:R.72, C:S.301, C:R.333, C:A.334, C:A.334 Salt bridges: C:R.72, C:R.333 PO4.7: 6 residues within 4Å: Chain C: R.178, E.217, E.219, L.300, G.302 Ligands: PO4.6 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:E.219, C:G.302 Water bridges: C:R.178, C:E.217, C:K.259, C:S.301 Salt bridges: C:R.178, C:K.259 PO4.8: 5 residues within 4Å: Chain B: N.35, Q.247 Chain C: E.236, H.237, R.240 7 PLIP interactions: 5 interactions with chain C, 2 interactions with chain B Hydrogen bonds: C:E.236, B:N.35, B:Q.247 Water bridges: C:H.237, C:R.240 Salt bridges: C:H.237, C:R.240 PO4.9: 6 residues within 4Å: Chain D: R.72, S.301, G.302, A.332, R.333 Ligands: PO4.10 9 PLIP interactions: 9 interactions with chain D Hydrogen bonds: D:G.302, D:A.332, D:R.333 Water bridges: D:R.72, D:R.72, D:S.301, D:A.334 Salt bridges: D:R.72, D:R.333 PO4.10: 6 residues within 4Å: Chain D: R.178, E.217, E.219, L.300, G.302 Ligands: PO4.9 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:E.219, D:G.302 Water bridges: D:K.176, D:R.178, D:K.259, D:S.301 Salt bridges: D:R.178, D:K.259 PO4.11: 5 residues within 4Å: Chain A: N.35, Q.247 Chain D: E.236, H.237, R.240 8 PLIP interactions: 6 interactions with chain D, 2 interactions with chain A Hydrogen bonds: D:E.236, D:E.236, A:N.35, A:Q.247 Water bridges: D:H.237, D:R.240 Salt bridges: D:H.237, D:R.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lafrance-Vanasse, J. et al., Carboxy-Terminus Recruitment Induced by Substrate Binding in Eukaryotic Fructose Bis-phosphate Aldolases. Biochemistry (2007)

Release Date

2007-08-21

Peptides

Fructose-1,6-bisphosphate aldolase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fructose-1,6-bisphosphate aldolase

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