SMTL ID : 2qe4.1

Estrogen receptor alpha ligand-binding domain in complex with a benzopyran agonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x JJ3: (3AS,4R,9BR)-4-(4-HYDROXYPHENYL)-6-(METHOXYMETHYL)-1,2,3,3A,4,9B-HEXAHYDROCYCLOPENTA[C]CHROMEN-8-OL(Non-covalent)

JJ3.1: 15 residues within 4Å: Chain A: L.43, T.44, L.46, A.47, E.50, W.80, L.84, M.85, R.91, F.101, M.118, I.121, L.125, H.221, L.222 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:T.44, A:L.46, A:A.47, A:W.80, A:W.80, A:L.84, A:L.222 Hydrogen bonds: A:L.84, A:R.91, A:H.221, A:H.221 Water bridges: A:R.91 pi-Stacking: A:F.101 JJ3.2: 13 residues within 4Å: Chain B: M.40, L.43, T.44, A.47, E.50, L.84, M.85, R.91, F.101, I.121, L.125, H.221, L.222 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:T.44, B:A.47, B:L.84, B:L.222, B:L.222, B:L.222 Hydrogen bonds: B:L.84, B:R.91, B:H.221 Water bridges: B:R.91 pi-Stacking: B:F.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Norman, B.H. et al., Benzopyrans as selective estrogen receptor beta agonists (SERBAs). Part 4: Functionalization of the benzopyran A-ring. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-09-04

Peptides

Estrogen receptor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Estrogen receptor

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