SMTL ID : 2qf3.1

Structure of the delta PDZ truncation of the DegS protease

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

homo-trimer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: L.66, H.83, V.84, H.185, G.186, N.187, S.188 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:L.66, A:G.186, A:N.187, A:S.188, A:S.188 Water bridges: A:H.185 Salt bridges: A:H.83, A:H.185 PO4.2: 10 residues within 4Å: Chain B: L.66, G.67, H.83, V.84, N.184, H.185, G.186, N.187, S.188, L.205 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:G.186, B:N.187, B:S.188, B:S.188, B:S.188, B:S.188 Salt bridges: B:H.83 PO4.3: 6 residues within 4Å: Chain C: L.66, H.83, H.185, G.186, S.188, L.205 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:T.65, C:G.186, C:S.188, C:S.188 Salt bridges: C:H.83, C:H.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sohn, J. et al., Allosteric activation of DegS, a stress sensor PDZ protease. Cell(Cambridge,Mass.) (2007)

Release Date

2007-12-11

Peptides

Protease degS: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Protease degS

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