SMTL ID : 2qio.1

X-Ray Structure of Enoyl-Acyl Carrier Protein Reductase from Bacillus Anthracis with Triclosan

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

homo-tetramer

Ligands

4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 26 residues within 4Å: Chain A: G.13, V.14, A.15, S.19, I.20, A.40, L.44, C.65, D.66, V.67, C.93, I.94, A.95, I.120, L.145, T.146, Y.147, K.164, A.190, G.191, P.192, I.193, T.195, L.196, S.197 Ligands: TCL.2 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:I.20, A:Y.147, A:Y.147, A:A.190 Hydrogen bonds: A:G.13, A:S.19, A:I.20, A:D.66, A:V.67, A:I.94, A:A.95, A:K.164, A:I.193, A:I.193, A:S.197 Water bridges: A:A.21, A:A.40, A:I.94, A:L.196, A:L.196 NAD.3: 26 residues within 4Å: Chain B: G.13, V.14, A.15, S.19, I.20, A.40, L.44, C.65, D.66, V.67, C.93, I.94, A.95, I.120, L.145, T.146, Y.147, K.164, A.190, G.191, P.192, I.193, T.195, L.196, S.197 Ligands: TCL.4 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:I.20, B:Y.147, B:A.190 Hydrogen bonds: B:G.13, B:S.19, B:I.20, B:D.66, B:V.67, B:I.94, B:A.95, B:K.164, B:I.193, B:I.193, B:T.195, B:S.197 Water bridges: B:A.21, B:A.40, B:I.94, B:L.196 NAD.5: 27 residues within 4Å: Chain C: G.13, V.14, A.15, S.19, I.20, A.40, L.44, C.65, D.66, V.67, T.68, C.93, I.94, A.95, I.120, L.145, T.146, Y.147, K.164, A.190, G.191, P.192, I.193, T.195, L.196, S.197 Ligands: TCL.6 23 PLIP interactions: 23 interactions with chain C Hydrophobic interactions: C:I.20, C:Y.147, C:Y.147, C:A.190 Hydrogen bonds: C:G.13, C:S.19, C:I.20, C:D.66, C:D.66, C:V.67, C:I.94, C:A.95, C:K.164, C:I.193, C:I.193, C:T.195, C:S.197 Water bridges: C:G.13, C:A.21, C:A.40, C:A.40, C:I.94, C:L.196 NAD.7: 27 residues within 4Å: Chain D: G.13, V.14, A.15, S.19, I.20, A.40, L.44, C.65, D.66, V.67, T.68, C.93, I.94, A.95, I.120, L.145, T.146, Y.147, K.164, A.190, G.191, P.192, I.193, T.195, L.196, S.197 Ligands: TCL.8 19 PLIP interactions: 19 interactions with chain D Hydrophobic interactions: D:I.20, D:Y.147, D:Y.147, D:A.190 Hydrogen bonds: D:G.13, D:S.19, D:I.20, D:D.66, D:V.67, D:I.94, D:A.95, D:K.164, D:I.193, D:I.193, D:S.197 Water bridges: D:A.21, D:A.40, D:I.94, D:L.196

4 x TCL: TRICLOSAN(Non-covalent)

TCL.2: 12 residues within 4Å: Chain A: A.95, F.96, A.97, L.102, Y.147, Y.157, P.192, S.197, A.198, V.201, F.204 Ligands: NAD.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.102, A:Y.157, A:V.201, A:F.204 Hydrogen bonds: A:Y.157 pi-Stacking: A:Y.147 Halogen bonds: A:A.97 TCL.4: 12 residues within 4Å: Chain B: A.95, F.96, A.97, L.102, Y.147, Y.157, M.160, P.192, S.197, A.198, V.201 Ligands: NAD.3 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:L.102, B:Y.157, B:V.201 Hydrogen bonds: B:Y.157, B:Y.157 pi-Stacking: B:Y.147 Halogen bonds: B:A.97 TCL.6: 13 residues within 4Å: Chain C: A.95, F.96, A.97, L.102, Y.147, Y.157, M.160, K.164, P.192, S.197, A.198, F.204 Ligands: NAD.5 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:L.102, C:Y.157, C:A.198, C:F.204 Hydrogen bonds: C:Y.157, C:Y.157 pi-Stacking: C:Y.147 Halogen bonds: C:A.97 TCL.8: 12 residues within 4Å: Chain D: A.95, A.97, L.102, Y.147, Y.157, M.160, P.192, S.197, A.198, V.201, F.204 Ligands: NAD.7 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:L.102, D:Y.157, D:V.201, D:F.204 Hydrogen bonds: D:Y.157 pi-Stacking: D:Y.147 Halogen bonds: D:A.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tipparaju, S.K. et al., Design and synthesis of aryl ether inhibitors of the Bacillus anthracis enoyl-ACP reductase. Chemmedchem (2008)

Release Date

2008-07-08

Peptides

Enoyl-(Acyl-carrier-protein) reductase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Enoyl-(Acyl-carrier-protein) reductase

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