SMTL ID : 2qir.1

Crystal structure of aminoglycoside acetyltransferase AAC(6')-Ib in complex whith coenzyme A and kanamycin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x COA: COENZYME A(Non-covalent)

COA.1: 21 residues within 4Å: Chain A: H.34, W.38, Q.106, L.107, L.108, L.114, G.115, K.116, G.117, L.118, G.119, T.120, N.147, L.148, R.149, A.150, R.152, C.153, Y.154, K.156 Ligands: 9CS.2 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:W.38, A:A.150 Hydrogen bonds: A:Q.106, A:L.108, A:G.115, A:K.116, A:G.117, A:G.117, A:L.118, A:G.119, A:T.120, A:N.147, A:R.149 Water bridges: A:W.38, A:Q.106, A:L.148, A:A.150, A:K.156, A:K.156 Salt bridges: A:R.152, A:K.156, A:K.156

1 x 9CS: (1R,2S,3S,4R,6S)-4,6-DIAMINO-3-[(3-AMINO-3-DEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-2-HYDROXYCYCLOHEXYL 2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSIDE(Non-covalent)

9CS.2: 13 residues within 4Å: Chain A: W.38, W.39, E.63, V.65, Q.81, Y.83, S.88, D.90, W.92, W.93, D.105, D.142 Ligands: COA.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.83, A:W.92 Hydrogen bonds: A:W.38, A:S.88, A:S.88, A:D.90, A:D.90, A:D.142 Water bridges: A:D.105, A:D.142, A:Y.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maurice, F. et al., Enzyme structural plasticity and the emergence of broad-spectrum antibiotic resistance. Embo Rep. (2008)

Release Date

2008-04-08

Peptides

Aminoglycoside 6-N-acetyltransferase type Ib11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aminoglycoside 6-N-acetyltransferase type Ib11

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