SMTL ID : 2qj2.1

A Mechanistic Basis for Converting a Receptor Tyrosine Kinase Agonist to an Antagonist

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.35, K.37, R.48 5 PLIP interactions: 5 interactions with chain A Water bridges: A:K.35, A:G.54 Salt bridges: A:K.35, A:K.37, A:R.48 SO4.2: 8 residues within 4Å: Chain A: R.101, I.104, I.105, G.106, G.108, R.109, S.110, Y.111 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.105, A:G.106, A:G.108, A:R.109, A:S.110 Water bridges: A:K.107 Salt bridges: A:R.101 SO4.3: 5 residues within 4Å: Chain A: R.143, G.144, K.145, D.146, L.147 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.144, A:D.146, A:L.147 Water bridges: A:D.146, A:D.146 Salt bridges: A:K.85 SO4.4: 5 residues within 4Å: Chain B: H.135, S.136, F.137, R.143, R.172 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:S.136 Water bridges: B:R.143, B:R.143, B:R.172, B:R.172 Salt bridges: B:R.143, B:R.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tolbert, W.D. et al., A mechanistic basis for converting a receptor tyrosine kinase agonist to an antagonist. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-09-18

Peptides

Hepatocyte growth factor: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hepatocyte growth factor