SMTL ID : 2qlk.1

Adenovirus AD35 fibre head

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

homo-trimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: I.146, P.202, F.203, F.204 Chain B: H.144, F.203 Ligands: GOL.2, GOL.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.146, A:P.202, A:F.204 Water bridges: A:I.146 GOL.2: 8 residues within 4Å: Chain B: I.146, P.202, F.203, F.204 Chain C: H.144, F.203 Ligands: GOL.1, GOL.3 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:I.146, B:P.202, B:F.204 Water bridges: B:I.146 GOL.3: 8 residues within 4Å: Chain A: H.144, F.203 Chain C: I.146, P.202, F.203, F.204 Ligands: GOL.1, GOL.2 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:I.146, C:P.202, C:F.204 Water bridges: C:I.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Identification of CD46 binding sites within the adenovirus serotype 35 fiber knob. J.Virol. (2007)

Release Date

2008-02-19

Peptides

Fiber: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Fiber