SMTL ID : 2qls.1 (1 other biounit)

crystal structure of hemoglobin from dog (Canis familiaris) at 3.5 Angstrom resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-1-1-mer

Ligands

2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 16 residues within 4Å: Chain A: Y.42, F.43, H.45, H.58, K.61, V.62, A.65, L.83, L.86, H.87, L.91, N.97, F.98, L.101, V.132, L.136 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:F.43, A:F.43, A:K.61, A:V.62, A:A.65, A:L.83, A:L.86, A:L.91, A:F.98, A:F.98, A:V.132, A:L.136 Salt bridges: A:H.45, A:H.58, A:K.61, A:K.61 pi-Stacking: A:H.58, A:H.58 Metal complexes: A:H.87 HEM.2: 15 residues within 4Å: Chain B: F.41, F.42, F.45, H.63, K.66, S.70, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 12 PLIP interactions: 12 interactions with chain B, Hydrophobic interactions: B:F.41, B:F.42, B:F.42, B:L.88, B:L.91, B:L.96, B:V.98, B:N.102, B:L.106, B:L.141 pi-Stacking: B:H.63 Metal complexes: B:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Packianathan, C. et al., Purification, Crystallization and Crystal structure analysis of hemoglobin from Dog (Canis familiaris). To be Published

Release Date

2008-07-22

Peptides

Hemoglobin subunit alpha: A
Hemoglobin subunit beta: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Hemoglobin subunit alpha

Hemoglobin subunit beta

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