- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 4 x PHE: PHENYLALANINE(Non-covalent)
PHE.3: 13 residues within 4Å:- Chain A: D.227, L.228, T.229, K.230, I.231
- Chain B: N.209, E.210, G.212, S.213, L.214, S.233, Y.243, F.245
9 PLIP interactions:3 interactions with chain A, 6 interactions with chain B- Hydrophobic interactions: A:L.228, B:L.214, B:L.214
- Hydrogen bonds: A:D.227, A:L.228, B:G.212, B:L.214
- pi-Stacking: B:Y.243, B:F.245
PHE.4: 13 residues within 4Å:- Chain A: N.209, E.210, G.212, S.213, L.214, S.233, Y.243, F.245
- Chain B: D.227, L.228, T.229, K.230, I.231
10 PLIP interactions:7 interactions with chain A, 3 interactions with chain B,- Hydrophobic interactions: A:L.214, A:L.214, B:L.228
- Hydrogen bonds: A:N.209, A:G.212, A:L.214, B:D.227, B:L.228
- pi-Stacking: A:Y.243, A:F.245
PHE.18: 13 residues within 4Å:- Chain C: D.227, L.228, T.229, K.230, I.231
- Chain D: N.209, E.210, G.212, S.213, L.214, S.233, Y.243, F.245
9 PLIP interactions:6 interactions with chain D, 3 interactions with chain C,- Hydrophobic interactions: D:L.214, D:L.214, C:L.228
- Hydrogen bonds: D:G.212, D:L.214, C:D.227, C:L.228
- pi-Stacking: D:Y.243, D:F.245
PHE.19: 13 residues within 4Å:- Chain C: N.209, E.210, G.212, S.213, L.214, S.233, Y.243, F.245
- Chain D: D.227, L.228, T.229, K.230, I.231
10 PLIP interactions:7 interactions with chain C, 3 interactions with chain D- Hydrophobic interactions: C:L.214, C:L.214, D:L.228
- Hydrogen bonds: C:N.209, C:G.212, C:L.214, D:D.227, D:L.228
- pi-Stacking: C:Y.243, C:F.245
- 22 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.5: 1 residues within 4Å:- Chain A: N.6
Ligand excluded by PLIPEDO.6: 3 residues within 4Å:- Chain A: R.198, D.227
- Chain B: N.209
Ligand excluded by PLIPEDO.7: 1 residues within 4Å:- Chain A: E.155
Ligand excluded by PLIPEDO.8: 3 residues within 4Å:- Chain A: R.266, A.269
- Ligands: ACT.2
Ligand excluded by PLIPEDO.9: 5 residues within 4Å:- Chain A: A.222, L.223, G.225
- Chain B: Q.211
- Chain D: R.216
Ligand excluded by PLIPEDO.10: 3 residues within 4Å:- Chain A: R.224, G.225, N.257
Ligand excluded by PLIPEDO.11: 3 residues within 4Å:- Chain A: T.43, E.44, Q.45
Ligand excluded by PLIPEDO.12: 2 residues within 4Å:- Chain A: K.101, M.103
Ligand excluded by PLIPEDO.13: 4 residues within 4Å:- Chain B: K.101, M.103, E.125, S.140
Ligand excluded by PLIPEDO.14: 4 residues within 4Å:- Chain B: G.225, I.226, D.227, I.250
Ligand excluded by PLIPEDO.15: 3 residues within 4Å:- Chain B: R.266, M.271, V.272
Ligand excluded by PLIPEDO.20: 1 residues within 4Å:- Chain C: N.6
Ligand excluded by PLIPEDO.21: 3 residues within 4Å:- Chain C: R.198, D.227
- Chain D: N.209
Ligand excluded by PLIPEDO.22: 1 residues within 4Å:- Chain C: E.155
Ligand excluded by PLIPEDO.23: 3 residues within 4Å:- Chain C: R.266, A.269
- Ligands: ACT.17
Ligand excluded by PLIPEDO.24: 5 residues within 4Å:- Chain B: R.216
- Chain C: A.222, L.223, G.225
- Chain D: Q.211
Ligand excluded by PLIPEDO.25: 3 residues within 4Å:- Chain C: R.224, G.225, N.257
Ligand excluded by PLIPEDO.26: 3 residues within 4Å:- Chain C: T.43, E.44, Q.45
Ligand excluded by PLIPEDO.27: 2 residues within 4Å:- Chain C: K.101, M.103
Ligand excluded by PLIPEDO.28: 4 residues within 4Å:- Chain D: K.101, M.103, E.125, S.140
Ligand excluded by PLIPEDO.29: 4 residues within 4Å:- Chain D: G.225, I.226, D.227, I.250
Ligand excluded by PLIPEDO.30: 3 residues within 4Å:- Chain D: R.266, M.271, V.272
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tan, K. et al., Structures of open (R) and close (T) states of prephenate dehydratase (PDT) - implication of allosteric regulation by L-phenylalanine. J.Struct.Biol. (2008)
- Release Date
- 2007-08-07
- Peptides
- Prephenate dehydratase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ACT: ACETATE ION(Non-functional Binders)
- 4 x PHE: PHENYLALANINE(Non-covalent)
- 22 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tan, K. et al., Structures of open (R) and close (T) states of prephenate dehydratase (PDT) - implication of allosteric regulation by L-phenylalanine. J.Struct.Biol. (2008)
- Release Date
- 2007-08-07
- Peptides
- Prephenate dehydratase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B