SMTL ID : 2qnz.1

Crystal structure of the complex between the mycobacterium beta-ketoacyl-acyl carrier protein synthase III (FABH) and SS-(2-hydroxyethyl)-O-decyl ester carbono(dithioperoxoic) acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x DFD: DECYL FORMATE(Covalent)

DFD.1: 14 residues within 4Å: Chain A: N.91, C.122, L.152, T.155, I.199, Q.201, P.217, F.218, V.219, S.291, G.320, A.321 Chain B: Q.96, T.97 10 PLIP interactions: 9 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:N.91, A:L.152, A:T.155, A:Q.201, A:Q.201, A:V.219, A:V.219, B:T.97 Hydrogen bonds: A:C.122, A:A.321 DFD.3: 15 residues within 4Å: Chain A: Q.96, T.97 Chain B: N.91, C.122, L.152, T.155, I.199, Q.201, W.205, P.217, F.218, V.219, S.291, G.320, A.321 14 PLIP interactions: 3 interactions with chain A, 11 interactions with chain B Hydrophobic interactions: A:Q.96, A:Q.96, A:T.97, B:N.91, B:L.152, B:T.155, B:I.199, B:Q.201, B:Q.201, B:W.205, B:V.219, B:V.219 Hydrogen bonds: B:C.122, B:A.321

2 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 4 residues within 4Å: Chain A: I.32, M.158, C.164, F.165 No protein-ligand interaction detected (PLIP) BME.4: 4 residues within 4Å: Chain B: I.32, M.158, C.164, F.165 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sachdeva, S. et al., Separate Entrance and Exit Portals for Ligand Traffic in Mycobacterium tuberculosis FabH. Chem.Biol. (2008)

Release Date

2008-05-06

Peptides

3-oxoacyl-[acyl-carrier-protein] synthase 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3-oxoacyl-[acyl-carrier-protein] synthase 3

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