SMTL ID : 2qvf.1

mouse E-cadherin domains 1,2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

8 x CA: CALCIUM ION(Non-covalent)

CA.1: 8 residues within 4Å: Chain A: E.11, E.69, D.100, Q.101, D.103, N.104, D.136 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.11, A:E.69, A:Q.101, A:D.103, A:D.136 CA.2: 6 residues within 4Å: Chain A: N.102, N.104, D.134, D.136, N.143, D.195 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.104, A:D.134, A:D.136, A:N.143, A:D.195 CA.3: 5 residues within 4Å: Chain A: E.11, D.67, E.69, D.103 Ligands: CA.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.11, A:D.67, A:E.69, A:D.103 CA.4: 3 residues within 4Å: Chain A: E.119, D.180, E.182 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.119, A:E.119, A:D.180, A:E.182, H2O.5 CA.5: 8 residues within 4Å: Chain B: E.11, E.69, D.100, Q.101, D.103, N.104, D.136 Ligands: CA.7 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.11, B:E.69, B:Q.101, B:D.103, B:D.136 CA.6: 6 residues within 4Å: Chain B: N.102, N.104, D.134, D.136, N.143, D.195 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:N.104, B:D.134, B:D.136, B:N.143, B:D.195 CA.7: 5 residues within 4Å: Chain B: E.11, D.67, E.69, D.103 Ligands: CA.5 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.11, B:D.67, B:E.69, B:D.103 CA.8: 3 residues within 4Å: Chain B: E.119, D.180, E.182 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.119, B:E.119, B:D.180, B:E.182, H2O.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carroll, K.J., E-cadherin domains 1,2. To be Published

Release Date

2008-08-12

Peptides

Epithelial-cadherin (E-cadherin) (Uvomorulin) (Cadherin-1) (ARC-1) (CD324 antigen): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Epithelial-cadherin (E-cadherin) (Uvomorulin) (Cadherin-1) (ARC-1) (CD324 antigen)

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