SMTL ID : 2qvh.1 (1 other biounit)

Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate (OSB)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.130, E.156, D.179 Ligands: OSB.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.130, A:E.156, A:D.179, H2O.5 MG.3: 6 residues within 4Å: Chain B: K.97, D.130, E.156, D.179, E.180 Ligands: OSB.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.130, B:E.156, B:D.179, H2O.6

2 x OSB: 2-SUCCINYLBENZOATE(Non-covalent)

OSB.2: 17 residues within 4Å: Chain A: F.16, R.17, N.73, T.75, K.97, D.130, N.132, E.156, D.179, R.183, K.203, S.227, S.228, V.230, G.254, T.257 Ligands: MG.1 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:F.16, A:V.230, A:T.257 Hydrogen bonds: A:N.73, A:T.75, A:N.132, A:D.179 Water bridges: A:T.75, A:K.97, A:S.227, A:S.227 Salt bridges: A:K.97, A:K.97, A:R.183, A:K.203 OSB.4: 17 residues within 4Å: Chain B: F.16, R.17, N.73, T.75, K.97, D.130, N.132, E.156, D.179, R.183, K.203, S.227, S.228, V.230, G.254, T.257 Ligands: MG.3 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:F.16, B:V.230, B:T.257 Hydrogen bonds: B:N.73, B:T.75, B:K.97, B:N.132, B:D.179, B:S.227 Water bridges: B:T.75, B:K.203 Salt bridges: B:K.97, B:K.97, B:R.183, B:K.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sugadev, R. et al., Crystal structure of O-succinylbenzoate synthase complexed with O-succinyl benzoate. To be Published

Release Date

2007-08-28

Peptides

O-succinylbenzoate-CoA synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

O-succinylbenzoate-CoA synthase

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