SMTL ID : 2qym.1

crystal structure of unliganded PDE4C2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.87, H.123, D.124, D.241 Ligands: MG.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.87, A:H.123, A:D.124, A:D.241, H2O.1, H2O.1 ZN.3: 5 residues within 4Å: Chain B: H.87, H.123, D.124, D.241 Ligands: MG.4 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.87, B:H.123, B:D.124, B:D.241, H2O.5, H2O.5

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.124 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.124, H2O.1, H2O.1, H2O.1, H2O.1, H2O.1 MG.4: 2 residues within 4Å: Chain B: D.124 Ligands: ZN.3 6 PLIP interactions: 1 interactions with chain B, 5 Ligand-Water interactions Metal complexes: B:D.124, H2O.5, H2O.5, H2O.6, H2O.6, H2O.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors. Biochem.J. (2007)

Release Date

2008-04-08

Peptides

Phosphodiesterase 4C: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Phosphodiesterase 4C