SMTL ID : 2qzl.1

Crystal Structure of human Beta Secretase complexed with IXS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x IXS: N-[(1S)-1-benzyl-2-{[(1S)-2-(isobutylamino)-1-methyl-2-oxoethyl]amino}ethyl]-N'-[(1R)-1-(4-fluorophenyl)ethyl]-5-[methyl(methylsulfonyl)amino]isophthalamide(Non-covalent)

IXS.1: 31 residues within 4Å: Chain A: G.37, Q.38, G.39, Y.40, L.56, D.58, G.60, S.61, V.95, P.96, Y.97, T.98, Q.99, F.134, I.136, W.141, I.144, I.152, Y.224, I.252, D.254, S.255, G.256, T.257, T.258, N.259, R.261, R.333, S.351, A.361, E.365 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:L.56, A:V.95, A:Y.97, A:Y.97, A:Q.99, A:F.134, A:F.134, A:I.136, A:W.141, A:I.152, A:I.252, A:T.257 Hydrogen bonds: A:G.60, A:T.98, A:T.98, A:Q.99, A:Q.99, A:G.256, A:G.256, A:T.258, A:N.259, A:S.351 Water bridges: A:T.257, A:T.258, A:T.258, A:R.261 Halogen bonds: A:E.365

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coburn, C.A. et al., BACE-1 inhibition by a series of psi[CH2NH] reduced amide isosteres. Bioorg.Med.Chem.Lett. (2006)

Release Date

2008-04-22

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1