SMTL ID : 2r03.1

Crystal Structure of ALIX/AIP1 in complex with the YPDL Late Domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

monomer

Ligands

1 x ASN- LEU- TYR- PRO- ASP- LEU- SER- GLU: p6-Gag(Non-covalent)

ASN-LEU-TYR-PRO-ASP-LEU-SER-GLU.1: 11 residues within 4Å: Chain A: L.439, V.497, A.501, A.504, D.505, V.508, N.668, E.671, G.672, F.675, E.678 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:A.504, A:V.508, A:F.675, A:F.675, A:F.675, A:E.678 Hydrogen bonds: A:D.505, A:D.505, A:E.671, A:E.671, A:E.671, A:E.671

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhai, Q. et al., Structural and functional studies of ALIX interactions with YPX(n)L late domains of HIV-1 and EIAV. Nat.Struct.Mol.Biol. (2008)

Release Date

2007-12-18

Peptides

Programmed cell death 6-interacting protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Programmed cell death 6-interacting protein

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