SMTL ID : 2r1i.1

Crystal structure of putative acetyltransferase (YP_831484.1) from Arthrobacter sp. FB24 at 1.65 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: D.142, T.143, D.144 Ligand excluded by PLIP

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: Y.169, R.170, E.171 Chain B: G.153, T.155 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.171, A:E.171, A:E.171, B:T.155 EDO.3: 4 residues within 4Å: Chain A: P.94, G.95, R.129, G.130 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.129 EDO.4: 6 residues within 4Å: Chain A: L.172 Chain B: R.127, G.130, G.131, A.132 Ligands: EDO.10 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.172 EDO.7: 2 residues within 4Å: Chain B: G.108, R.109 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.109 EDO.8: 6 residues within 4Å: Chain A: G.153, T.155 Chain B: Y.169, R.170, E.171 Ligands: EDO.9 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:T.155, B:E.171, B:E.171 EDO.9: 2 residues within 4Å: Chain B: E.171 Ligands: EDO.8 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.171 Water bridges: B:L.172, B:L.172 EDO.10: 3 residues within 4Å: Chain B: R.127, G.130 Ligands: EDO.4 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.128, B:G.130 Water bridges: B:G.130

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 3 residues within 4Å: Chain A: N.44, P.50 Chain B: W.92 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.44, A:P.50 Water bridges: A:E.102, A:E.102 GOL.6: 7 residues within 4Å: Chain A: Y.93, L.133, E.158, M.165 Chain B: Y.167, Y.169, E.171 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:Y.93, A:E.158, B:E.171, B:E.171 Water bridges: A:E.135, B:Y.167 GOL.11: 2 residues within 4Å: Chain B: T.45, E.46 1 PLIP interactions: 1 interactions with chain B Water bridges: B:E.46 GOL.12: 7 residues within 4Å: Chain A: D.101, Y.167 Chain B: R.88, N.90, Y.93, L.133, E.135 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.88, A:D.101 Water bridges: B:R.88, B:N.90, B:N.90, A:Y.167 GOL.13: 7 residues within 4Å: Chain B: L.100, D.101, E.102, L.103, I.136, N.137, Y.149 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.101, B:L.103, B:N.137 Water bridges: B:E.102 GOL.14: 6 residues within 4Å: Chain A: W.92 Chain B: N.44, A.49, P.50, E.102, Y.104 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joint Center for Structural Genomics (JCSG), Crystal structure of putative acetyltransferase (YP_831484.1) from Arthrobacter sp. FB24 at 1.65 A resolution. To be published

Release Date

2007-09-11

Peptides

GCN5-related N-acetyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

GCN5-related N-acetyltransferase