SMTL ID : 2r25.1

Complex of YPD1 and SLN1-R1 with bound Mg2+ and BeF3-

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain B: D.10, D.59, Q.61 Ligands: BEF.3 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.10, B:D.59, B:Q.61, H2O.7, H2O.7

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 7 residues within 4Å: Chain B: Y.53, N.54, M.55, I.56, Y.80, S.82, P.83 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:M.55

1 x BEF: BERYLLIUM TRIFLUORIDE ION(Covalent)

BEF.3: 8 residues within 4Å: Chain A: H.64 Chain B: D.59, V.60, Q.61, T.88, A.89, K.110 Ligands: MG.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, X. et al., Crystal structure of a complex between the phosphorelay protein YPD1 and the response regulator domain of SLN1 bound to a phosphoryl analog. J.Mol.Biol. (2008)

Release Date

2008-01-15

Peptides

Phosphorelay intermediate protein YPD1: A
Osmosensing histidine protein kinase SLN1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphorelay intermediate protein YPD1

Osmosensing histidine protein kinase SLN1

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