SMTL ID : 2r2o.1

Crystal structure of the effector domain of human Plexin B1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

12 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.2: 3 residues within 4Å: Chain A: L.105, W.106 Chain B: R.108 No protein-ligand interaction detected (PLIP) UNX.3: 3 residues within 4Å: Chain A: W.83, P.118, A.121 No protein-ligand interaction detected (PLIP) UNX.4: 1 residues within 4Å: Chain A: T.71 No protein-ligand interaction detected (PLIP) UNX.5: 4 residues within 4Å: Chain A: C.50, R.108, T.111, Q.113 No protein-ligand interaction detected (PLIP) UNX.6: 3 residues within 4Å: Chain A: S.54, S.94, D.95 No protein-ligand interaction detected (PLIP) UNX.7: 2 residues within 4Å: Chain A: P.118, D.119 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain B: S.54, S.94, D.95 No protein-ligand interaction detected (PLIP) UNX.9: 3 residues within 4Å: Chain A: R.108 Chain B: G.104, L.105 No protein-ligand interaction detected (PLIP) UNX.10: 1 residues within 4Å: Chain B: S.85 No protein-ligand interaction detected (PLIP) UNX.11: 2 residues within 4Å: Chain B: P.74, D.75 No protein-ligand interaction detected (PLIP) UNX.12: 3 residues within 4Å: Chain B: K.57, P.76, R.77 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tong, Y. et al., Binding of Rac1, Rnd1, and RhoD to a novel Rho GTPase interaction motif destabilizes dimerization of the plexin-B1 effector domain. J.Biol.Chem. (2007)

Release Date

2007-09-04

Peptides

Plexin-B1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Plexin-B1