SMTL ID : 2r37.3 (2 other biounits)

Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-tetramer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: G.50, G.51, L.52, W.158, N.159, F.160 Ligand excluded by PLIP CL.3: 6 residues within 4Å: Chain B: G.50, G.51, L.52, W.158, N.159, F.160 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain C: G.50, G.51, L.52, W.158, N.159 Ligand excluded by PLIP CL.7: 5 residues within 4Å: Chain D: G.50, G.51, L.52, W.158, N.159 Ligand excluded by PLIP

4 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: S.143, L.146 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:L.146, B:S.143, B:S.143 NA.4: 2 residues within 4Å: Chain B: S.143, L.146 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:L.146, A:S.143, A:S.143 NA.6: 2 residues within 4Å: Chain C: S.143, L.146 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:S.143, C:L.146 Water bridges: D:S.143 NA.8: 2 residues within 4Å: Chain D: S.143, L.146 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain D Water bridges: C:S.143 Hydrogen bonds: D:L.146, D:L.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pilka, E.S. et al., Crystal structure of human glutathione peroxidase 3 (selenocysteine to glycine mutant). TO BE PUBLISHED

Release Date

2007-09-11

Peptides

Glutathione peroxidase 3: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

Glutathione peroxidase 3

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