SMTL ID : 2r42.1

The Biochemical and Structural Basis for feedback Inhibition of Mevalonate Kinase and Isoprenoid Metabolism

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: G.144, S.146, A.147, E.193, D.204 Ligands: FPS.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.204 MG.3: 6 residues within 4Å: Chain B: G.144, S.146, A.147, E.193, D.204 Ligands: FPS.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.204

2 x FPS: S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE(Non-covalent)

FPS.2: 13 residues within 4Å: Chain A: L.53, N.55, S.108, V.133, S.135, G.140, G.142, L.143, G.144, S.145, S.146, Y.149 Ligands: MG.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.53, A:N.55, A:V.133, A:Y.149, A:Y.149 Hydrogen bonds: A:G.142, A:L.143, A:G.144, A:S.145, A:S.145, A:S.146 Water bridges: A:A.141, A:S.145 FPS.4: 13 residues within 4Å: Chain B: L.53, N.55, S.108, V.133, S.135, G.140, G.142, L.143, G.144, S.145, S.146, Y.149 Ligands: MG.3 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.53, B:N.55, B:V.133, B:Y.149, B:Y.149 Hydrogen bonds: B:G.142, B:L.143, B:G.144, B:S.145, B:S.145, B:S.146 Water bridges: B:A.141, B:S.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fu, Z. et al., Biochemical and Structural Basis for Feedback Inhibition of Mevalonate Kinase and Isoprenoid Metabolism. Biochemistry (2008)

Release Date

2008-06-24

Peptides

Mevalonate kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Mevalonate kinase

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