SMTL ID : 2r53.1

Crystal structure analysis of Bone Morphogenetic Protein-6 variant B2 (B2-BMP-6)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 3 residues within 4Å: Chain A: N.60, I.63 Chain B: M.108 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.60 MPD.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MPD.3: 2 residues within 4Å: Chain B: P.36, S.90 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:P.36 Hydrogen bonds: B:A.35 MPD.4: 4 residues within 4Å: Chain A: W.29, Y.105 Chain B: N.60, V.64 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:V.64, A:W.29, A:Y.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saremba, S. et al., Type I receptor binding of bone morphogenetic protein 6 is dependent on N-glycosylation of the ligand. Febs J. (2007)

Release Date

2008-01-15

Peptides

Bone morphogenetic protein 6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Bone morphogenetic protein 6