SMTL ID : 2r5q.2 (1 other biounit)

Crystal Structure Analysis of HIV-1 Subtype C Protease Complexed with Nelfinavir

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x 1UN: 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE(Non-covalent)

1UN.1: 23 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, D.30, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: D.25, G.27, A.28, D.29, D.30, I.47, G.48, G.49, I.50, P.81, I.84 20 PLIP interactions: 9 interactions with chain A, 11 interactions with chain B Hydrophobic interactions: A:L.23, A:I.47, A:I.50, A:P.81, A:V.82, A:I.84, B:A.28, B:I.50, B:I.50, B:P.81, B:I.84 Water bridges: A:G.27, A:D.29 Salt bridges: A:D.25, B:D.25 Hydrogen bonds: B:D.25, B:G.27, B:G.27, B:D.30, B:D.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Coman, R.M. et al., The Contribution of Naturally Occurring Polymorphisms in Altering the Biochemical and Structural Characteristics of HIV-1 Subtype C Protease. Biochemistry (2008)

Release Date

2007-11-20

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Protease

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