SMTL ID : 2r72.1

Crystal structure of infectious bursal disease virus VP1 polymerase, incubated with Mg2+ ion.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.15 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: D.409, L.424, K.426, G.427 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.409, A:L.424 MG.2: 4 residues within 4Å: Chain A: A.408, D.409, T.496, N.500 No protein-ligand interaction detected (PLIP) MG.3: 6 residues within 4Å: Chain A: N.410, I.411, Y.412, S.421, I.422, D.423 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:I.422

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garriga, D. et al., Activation mechanism of a noncanonical RNA-dependent RNA polymerase. Proc.Natl.Acad.Sci.Usa (2007)

Release Date

2007-11-27

Peptides

INFECTIOUS BURSAL DISEASE VIRUS VP1 POLYMERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

INFECTIOUS BURSAL DISEASE VIRUS VP1 POLYMERASE

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