SMTL ID : 2rc6.1 (3 other biounits)

Refined structure of FNR from Leptospira interrogans bound to NADP+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: L.188, E.189, H.224 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.189, A:E.189, A:H.224

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) SO4.3: 2 residues within 4Å: Chain A: E.297, H.301 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.297 Salt bridges: A:H.301

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.4: 20 residues within 4Å: Chain A: S.69, R.94, L.95, Y.96, S.97, I.115, I.116, K.117, D.119, N.120, I.121, F.130, K.131, G.132, V.133, C.134, S.135, T.175, E.312, Y.314 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:E.312, A:Y.314 Hydrogen bonds: A:L.95, A:L.95, A:Y.96, A:S.97, A:I.115, A:K.117, A:D.119, A:D.119, A:V.133, A:C.134, A:S.135 Salt bridges: A:R.94, A:R.94 pi-Stacking: A:Y.96, A:F.130, A:Y.314, A:Y.314

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.5: 14 residues within 4Å: Chain A: K.117, T.173, G.174, T.175, G.204, A.205, P.206, S.234, R.235, R.245, Y.247, G.274, P.275, M.278 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:K.117, A:T.175, A:A.205, A:S.234, A:S.234 Water bridges: A:R.41, A:N.120, A:R.235, A:Y.247, A:I.248, A:M.278, A:G.281 Salt bridges: A:K.117, A:R.235, A:R.245 pi-Stacking: A:Y.247, A:Y.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nascimento, A.S. et al., Crystal structures of Leptospira interrogans FAD-containing ferredoxin-NADP+ reductase and its complex with NADP+. Bmc Struct.Biol. (2007)

Release Date

2008-03-25

Peptides

Ferredoxin-NADP reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ferredoxin-NADP reductase

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