SMTL ID : 2rc7.1 (1 other biounit)

Crystal structure of the NR3A ligand binding core complex with glycine at 1.58 Angstrom resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

monomer

Ligands

1 x BR: BROMIDE ION(Non-covalent)

BR.1: 7 residues within 4Å: Chain A: R.21, C.29, P.30, A.31, G.32, C.67 Ligands: CL.2 Ligand excluded by PLIP

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: R.21, C.29, P.30, A.31 Ligands: BR.1 Ligand excluded by PLIP CL.3: 3 residues within 4Å: Chain A: P.139, F.141, K.274 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: K.96, R.177, P.202 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: R.152 Ligand excluded by PLIP

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 5 residues within 4Å: Chain A: L.112, L.113, G.115, P.257, P.258 No protein-ligand interaction detected (PLIP) GOL.7: 5 residues within 4Å: Chain A: D.74, F.278, V.281, L.282, K.285 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.74 GOL.8: 5 residues within 4Å: Chain A: H.165, F.189, P.190, E.191, M.192 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.165, A:H.165, A:E.191, A:M.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yao, Y. et al., Molecular mechanism of ligand recognition by NR3 subtype glutamate receptors. Embo J. (2008)

Release Date

2008-08-05

Peptides

Glutamate [NMDA] receptor subunit 3A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glutamate [NMDA] receptor subunit 3A

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