SMTL ID : 2rgp.1

Structure of EGFR in complex with hydrazone, a potent dual inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 2 residues within 4Å: Chain A: R.102, K.212 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.102 Salt bridges: A:R.102, A:K.212 PO4.2: 5 residues within 4Å: Chain A: R.131, L.132, V.133, R.135, K.159 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.133, A:V.133 Salt bridges: A:R.135, A:K.159

1 x HYZ: N-[1-(3-fluorobenzyl)-1H-indazol-5-yl]-5-[(piperidin-1-ylamino)methyl]pyrimidine-4,6-diamine(Non-covalent)

HYZ.3: 20 residues within 4Å: Chain A: L.17, G.18, V.25, A.42, K.44, M.65, C.74, R.75, L.76, L.87, T.89, Q.90, L.91, M.92, G.95, D.99, L.143, T.153, D.154, F.155 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.17, A:V.25, A:A.42, A:K.44, A:T.89, A:L.143, A:T.153 Hydrogen bonds: A:M.92, A:M.92 pi-Stacking: A:F.155 Halogen bonds: A:T.89

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, G. et al., 4-Amino-6-arylamino-pyrimidine-5-carbaldehyde hydrazones as potent ErbB-2/EGFR dual kinase inhibitors. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-08-26

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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