SMTL ID : 2rhd.1

Crystal structure of Cryptosporidium parvum small GTPase RAB1A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

monomer

Ligands

3 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.23 Ligands: GDP.4 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.23, H2O.1, H2O.1, H2O.2, H2O.3 MG.2: 1 residues within 4Å: Chain A: D.95 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.95, H2O.1, H2O.2 MG.3: 1 residues within 4Å: Chain A: D.95 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.95, H2O.1

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.4: 18 residues within 4Å: Chain A: D.17, S.18, G.19, V.20, G.21, K.22, S.23, C.24, Y.34, D.36, N.122, K.123, D.125, L.126, S.152, A.153, K.154 Ligands: MG.1 22 PLIP interactions: 22 interactions with chain A Hydrogen bonds: A:G.19, A:V.20, A:G.21, A:K.22, A:S.23, A:C.24, A:Y.34, A:D.36, A:N.122, A:K.123, A:K.123, A:S.152, A:A.153, A:K.154 Water bridges: A:S.23, A:S.23, A:D.36, A:K.154 Salt bridges: A:K.22, A:D.125 pi-Stacking: A:Y.34, A:Y.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, A. et al., Crystal structure of Cryptosporidium parvum small GTPase RAB1A. To be Published

Release Date

2007-10-23

Peptides

Small GTP binding protein rab1a: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Small GTP binding protein rab1a