- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 9 x CA: CALCIUM ION(Non-covalent)
- 3 x 289: D-glycero-alpha-D-manno-heptopyranose(Non-covalent)
289.4: 7 residues within 4Å:- Chain A: E.126, N.128, E.134, N.146, D.147, R.148
- Ligands: CA.1
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:E.126, A:N.128, A:E.134, A:R.148
- Water bridges: A:D.130
- Salt bridges: A:R.148
289.8: 8 residues within 4Å:- Chain B: E.126, N.128, D.130, E.134, N.146, D.147, R.148
- Ligands: CA.5
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:E.126, B:N.128, B:D.130, B:D.130, B:E.134, B:N.146
289.12: 8 residues within 4Å:- Chain C: E.126, N.128, D.130, E.134, N.146, D.147, R.148
- Ligands: CA.9
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:E.126, C:N.128, C:D.130, C:E.134, C:N.146
- Water bridges: C:R.148
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, H. et al., Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein d. Biochemistry (2008)
- Release Date
- 2008-01-15
- Peptides
- Pulmonary surfactant-associated protein D: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 9 x CA: CALCIUM ION(Non-covalent)
- 3 x 289: D-glycero-alpha-D-manno-heptopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, H. et al., Recognition of heptoses and the inner core of bacterial lipopolysaccharides by surfactant protein d. Biochemistry (2008)
- Release Date
- 2008-01-15
- Peptides
- Pulmonary surfactant-associated protein D: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C