SMTL ID : 2rmp.1

RMP-pepstatin A complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x IVA- VAL- VAL- STA- ALA- STA: PEPSTATIN(Non-covalent)

IVA-VAL-VAL-STA-ALA-STA.1: 19 residues within 4Å: Chain A: E.19, L.36, D.38, G.40, Y.82, G.83, T.84, P.117, L.132, N.140, F.210, T.235, D.237, G.239, T.240, N.241, L.321, G.325, I.329 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.36, A:Y.82, A:L.132, A:F.210, A:L.321 Hydrogen bonds: A:D.38, A:G.40, A:G.83, A:T.84, A:T.240, A:N.241, A:N.241

1 x NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-BMA.2: 7 residues within 4Å: Chain A: N.77, L.78, N.79, N.88, G.89, D.112, N.113 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.89, A:D.112, A:N.113

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 5 residues within 4Å: Chain A: D.8, E.181, N.188, L.191, Y.358 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, J. et al., Structure of the Rhizomucor miehei aspartic proteinase complexed with the inhibitor pepstatin A at 2.7 A resolution. Acta Crystallogr.,Sect.D (1999)

Release Date

1997-09-17

Peptides

MUCOROPEPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MUCOROPEPSIN

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