SMTL ID : 2std.1

SCYTALONE DEHYDRATASE COMPLEXED WITH TIGHT-BINDING INHIBITOR CARPROPAMID

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.107, H.126, H.128 Chain B: R.107, P.109, H.126 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Water bridges: B:Q.111 Salt bridges: B:R.107, B:H.126, A:R.107, A:H.126, A:H.128 SO4.3: 6 residues within 4Å: Chain B: R.107, H.126, H.128 Chain C: R.107, P.109, H.126 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain C Salt bridges: B:R.107, B:H.126, B:H.128, C:R.107, C:H.126 Water bridges: C:Q.111 SO4.5: 6 residues within 4Å: Chain A: R.107, P.109, H.126 Chain C: R.107, H.126, H.128 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain C Water bridges: A:Q.111 Salt bridges: A:R.107, A:H.126, C:R.107, C:H.126, C:H.128

3 x CRP: ((1RS,3SR)-2,2-DICHLORO-N-[(R)-1-(4-CHLOROPHENYL)ETHYL]-1-ETHYL-3-METHYLCYCLOPROPANECARBOXAMIDE(Non-covalent)

CRP.2: 19 residues within 4Å: Chain A: W.26, Y.30, Y.50, V.75, L.76, H.85, V.108, H.110, A.127, S.129, N.131, L.147, P.149, I.151, W.153, F.158, F.162, G.165, F.169 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.30, A:Y.50, A:V.75, A:L.76, A:V.108, A:A.127, A:I.151, A:W.153, A:F.158 Hydrogen bonds: A:Y.50 Water bridges: A:H.85 pi-Stacking: A:F.162 Halogen bonds: A:S.129, A:N.131 CRP.4: 19 residues within 4Å: Chain B: W.26, Y.30, Y.50, V.75, L.76, H.85, V.108, H.110, A.127, S.129, N.131, L.147, P.149, I.151, W.153, F.158, F.162, G.165, F.169 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:Y.30, B:Y.50, B:V.75, B:L.76, B:V.108, B:A.127, B:I.151, B:W.153, B:F.158 Hydrogen bonds: B:Y.50 Water bridges: B:H.85 pi-Stacking: B:F.162 Halogen bonds: B:S.129, B:N.131 CRP.6: 19 residues within 4Å: Chain C: W.26, Y.30, Y.50, V.75, L.76, H.85, V.108, H.110, A.127, S.129, N.131, L.147, P.149, I.151, W.153, F.158, F.162, G.165, F.169 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:Y.30, C:Y.50, C:V.75, C:L.76, C:V.108, C:A.127, C:I.151, C:W.153, C:F.158 Hydrogen bonds: C:Y.50 Water bridges: C:H.85 pi-Stacking: C:F.162 Halogen bonds: C:S.129, C:N.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakasako, M. et al., Cryogenic X-ray crystal structure analysis for the complex of scytalone dehydratase of a rice blast fungus and its tight-binding inhibitor, carpropamid: the structural basis of tight-binding inhibition. Biochemistry (1998)

Release Date

1999-02-16

Peptides

SCYTALONE DEHYDRATASE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

SCYTALONE DEHYDRATASE

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