SMTL ID : 2tnf.1

1.4 A RESOLUTION STRUCTURE OF MOUSE TUMOR NECROSIS FACTOR, TOWARDS MODULATION OF ITS SELECTIVITY AND TRIMERISATION

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-trimer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 9 residues within 4Å: Chain A: P.116, I.117, Y.118 Chain B: P.116, I.117, Y.118 Chain C: P.116, I.117, Y.118 6 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: C:Y.118, A:Y.118, B:Y.118 Water bridges: C:Y.118, A:Y.118, B:Y.118

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 5 residues within 4Å: Chain A: L.57, Y.118 Chain B: Y.118 Chain C: L.57, Y.118 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:L.57, A:L.57 Hydrogen bonds: C:Y.118, C:Y.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baeyens, K.J. et al., The structure of mouse tumour-necrosis factor at 1.4 A resolution: towards modulation of its selectivity and trimerization. Acta Crystallogr.,Sect.D (1999)

Release Date

1999-10-12

Peptides

PROTEIN (TUMOR NECROSIS FACTOR ALPHA): ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

PROTEIN (TUMOR NECROSIS FACTOR ALPHA)