SMTL ID : 2uvq.1

Crystal structure of human uridine-cytidine kinase 1 in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-tetramer

Ligands

4 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 13 residues within 4Å: Chain A: G.33, T.34, A.35, S.36, G.37, K.38, S.39, T.40, E.140, R.170, R.174, V.216, D.217 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.33, A:A.35, A:S.36, A:G.37, A:G.37, A:K.38, A:S.39, A:T.40, A:T.40, A:R.174, A:V.216, A:D.217, A:D.217 Salt bridges: A:K.38, A:R.174, A:R.174 pi-Cation interactions: A:R.170, A:R.170 ADP.2: 13 residues within 4Å: Chain B: G.33, T.34, A.35, S.36, G.37, K.38, S.39, T.40, E.140, R.170, R.174, V.216, D.217 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:G.33, B:A.35, B:S.36, B:G.37, B:G.37, B:K.38, B:S.39, B:T.40, B:T.40, B:R.174, B:V.216, B:D.217, B:D.217 Salt bridges: B:K.38, B:R.174, B:R.174 pi-Cation interactions: B:R.170, B:R.170 ADP.3: 13 residues within 4Å: Chain C: G.33, T.34, A.35, S.36, G.37, K.38, S.39, T.40, E.140, R.170, R.174, V.216, D.217 19 PLIP interactions: 19 interactions with chain C Hydrogen bonds: C:G.33, C:A.35, C:S.36, C:G.37, C:G.37, C:K.38, C:S.39, C:T.40, C:R.174, C:V.216, C:D.217, C:D.217 Water bridges: C:D.217, C:D.217 Salt bridges: C:K.38, C:R.174, C:R.174 pi-Cation interactions: C:R.170, C:R.170 ADP.4: 13 residues within 4Å: Chain D: G.33, T.34, A.35, S.36, G.37, K.38, S.39, T.40, E.140, R.170, R.174, V.216, D.217 19 PLIP interactions: 19 interactions with chain D Hydrogen bonds: D:G.33, D:A.35, D:S.36, D:G.37, D:G.37, D:K.38, D:S.39, D:T.40, D:R.174, D:V.216, D:D.217, D:D.217 Water bridges: D:D.217, D:D.217 Salt bridges: D:K.38, D:R.174, D:R.174 pi-Cation interactions: D:R.170, D:R.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kosinska, U. et al., Structure of Human Uridine-Cytidine Kinase 1. To be Published

Release Date

2007-03-27

Peptides

URIDINE-CYTIDINE KINASE 1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

URIDINE-CYTIDINE KINASE 1

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