SMTL ID : 2uz9.1

Human guanine deaminase (guaD) in complex with zinc and its product Xanthine.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.104, H.106, H.262, H.301, D.352 Ligands: XAN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.104, A:H.106, A:H.262, A:D.352 ZN.3: 6 residues within 4Å: Chain B: H.104, H.106, H.262, H.301, D.352 Ligands: XAN.4 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.104, B:H.106, B:H.262, B:D.352

2 x XAN: XANTHINE(Non-covalent)

XAN.2: 13 residues within 4Å: Chain A: H.106, Q.109, L.121, W.124, L.125, T.129, R.235, F.236, H.262, E.265, H.301, D.352 Ligands: ZN.1 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:Q.109, A:R.235, A:E.265, A:S.326 Water bridges: A:Q.109, A:E.265, A:E.269, A:D.352 pi-Stacking: A:F.236, A:H.262, A:H.262 XAN.4: 13 residues within 4Å: Chain B: H.106, Q.109, L.121, W.124, L.125, T.129, R.235, F.236, H.262, E.265, H.301, D.352 Ligands: ZN.3 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:Q.109, B:R.235, B:E.265, B:S.326 Water bridges: B:Q.109, B:E.265, B:E.269, B:D.352 pi-Stacking: B:F.236, B:H.262, B:H.262

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moche, M. et al., Human Guanine Deaminase (Guad) in Complex with Zinc and its Product Xhantine. To be Published

Release Date

2007-05-08

Peptides

GUANINE DEAMINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

GUANINE DEAMINASE

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