SMTL ID : 2uzp.1 (2 other biounits)

Crystal structure of the C2 domain of human protein kinase C gamma.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 6 residues within 4Å: Chain A: S.1, M.2, H.3, T.4, A.140 Ligands: CO.2 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.140 Water bridges: A:T.4

1 x CO: COBALT (II) ION(Non-covalent)

CO.2: 5 residues within 4Å: Chain A: S.1, M.2, H.3, T.4 Ligands: PLP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.3, H2O.6

3 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.36, D.42, D.95, W.96, D.97 Ligands: CA.4 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.36, A:D.42, A:D.95, A:W.96, H2O.2 CA.4: 7 residues within 4Å: Chain A: M.35, D.36, D.95, D.97, D.103 Ligands: CA.3, SO4.6 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:M.35, A:D.36, A:D.95, A:D.97, A:D.103 CA.5: 5 residues within 4Å: Chain A: D.97, S.100, R.101, D.103 Ligands: SO4.6 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.97, A:S.100, A:R.101, A:D.103

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 9 residues within 4Å: Chain A: M.35, D.36, P.37, D.97, T.99, S.100, D.103 Ligands: CA.4, CA.5 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.36, A:D.36, A:T.99, A:S.100, A:S.100, A:S.100 SO4.7: 5 residues within 4Å: Chain A: R.88, F.110, G.111, E.114, N.136 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.111, A:N.136 Water bridges: A:R.88, A:R.88, A:E.114, A:N.136 Salt bridges: A:R.88 SO4.8: 3 residues within 4Å: Chain A: R.6, R.7, N.128 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.128, A:N.128 Water bridges: A:R.6, A:R.6, A:R.7 Salt bridges: A:R.7 SO4.9: 6 residues within 4Å: Chain A: Y.44, K.46, K.58, K.60, N.102 Ligands: EDO.12 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.44, A:Y.44, A:N.102 Salt bridges: A:K.46, A:K.58, A:K.60 SO4.10: 3 residues within 4Å: Chain A: W.94, R.101, Q.129 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.129 Salt bridges: A:R.101 SO4.11: 5 residues within 4Å: Chain A: M.2, H.3, T.4, R.6, K.125 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:T.4, A:T.4, A:T.4 Water bridges: A:K.125, A:K.125 Salt bridges: A:R.6, A:K.125

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.12: 6 residues within 4Å: Chain A: Y.44, K.46, W.94, R.101 Ligands: SO4.9, EDO.13 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.44, A:Y.44, A:K.46, A:R.101 EDO.13: 3 residues within 4Å: Chain A: R.101, N.102 Ligands: EDO.12 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pike, A.C.W. et al., Crystal Structure of C2 Domain of Protein Kinase C Gamma. To be Published

Release Date

2007-05-29

Peptides

PROTEIN KINASE C GAMMA TYPE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN KINASE C GAMMA TYPE

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