- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-octamer
- Ligands
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 2 residues within 4Å:- Chain B: E.87, S.88
6 PLIP interactions:1 interactions with chain B, 5 Ligand-Water interactions- Metal complexes: B:E.87, H2O.3, H2O.6, H2O.6, H2O.6, H2O.6
MG.5: 2 residues within 4Å:- Chain D: E.87, S.88
6 PLIP interactions:1 interactions with chain D, 5 Ligand-Water interactions- Metal complexes: D:E.87, H2O.9, H2O.11, H2O.11, H2O.11, H2O.11
MG.8: 2 residues within 4Å:- Chain F: E.87, S.88
6 PLIP interactions:1 interactions with chain F, 5 Ligand-Water interactions- Metal complexes: F:E.87, H2O.14, H2O.17, H2O.17, H2O.17, H2O.17
MG.11: 2 residues within 4Å:- Chain H: E.87, S.88
6 PLIP interactions:1 interactions with chain H, 5 Ligand-Water interactions- Metal complexes: H:E.87, H2O.20, H2O.22, H2O.22, H2O.23, H2O.23
- 4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
1PE.3: 10 residues within 4Å:- Chain B: G.21, R.22, A.26, P.27, L.28, L.49, I.50, Q.51, T.58, E.59
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:A.26, B:L.28, B:Q.51, B:T.58
- Water bridges: B:T.58
1PE.6: 10 residues within 4Å:- Chain D: G.21, R.22, A.26, P.27, L.28, L.49, I.50, Q.51, T.58, E.59
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:A.26, D:L.28, D:Q.51, D:T.58
- Water bridges: D:T.58
1PE.9: 10 residues within 4Å:- Chain F: G.21, R.22, A.26, P.27, L.28, L.49, I.50, Q.51, T.58, E.59
5 PLIP interactions:5 interactions with chain F- Hydrogen bonds: F:A.26, F:L.28, F:Q.51, F:T.58
- Water bridges: F:T.58
1PE.12: 10 residues within 4Å:- Chain H: G.21, R.22, A.26, P.27, L.28, L.49, I.50, Q.51, T.58, E.59
5 PLIP interactions:5 interactions with chain H- Hydrogen bonds: H:A.26, H:L.28, H:Q.51, H:T.58
- Water bridges: H:T.58
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Elkins, J.M. et al., Unusual Binding Interactions in Pdz Domain Crystal Structures Help Explain Binding Mechanisms. Protein Sci. (2010)
- Release Date
- 2007-06-12
- Peptides
- PDZ AND LIM DOMAIN PROTEIN 4: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
BG
AH
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-octamer
- Ligands
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Elkins, J.M. et al., Unusual Binding Interactions in Pdz Domain Crystal Structures Help Explain Binding Mechanisms. Protein Sci. (2010)
- Release Date
- 2007-06-12
- Peptides
- PDZ AND LIM DOMAIN PROTEIN 4: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
BG
AH
B