SMTL ID : 2v3i.1

Hypocrea jecorina Cel7A in complex with (R)-dihydroxy-phenanthrenolol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: N.270, F.273, T.281, P.314 2 PLIP interactions: 2 interactions with chain A Water bridges: A:N.270, A:Q.313

2 x CO: COBALT (II) ION(Non-covalent)

CO.2: 2 residues within 4Å: Chain A: E.295, E.325 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.295, A:E.295, A:E.325 CO.3: 2 residues within 4Å: Chain A: H.206, E.239 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.206, A:E.239, H2O.27, H2O.27, H2O.27, H2O.27

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 7 residues within 4Å: Chain A: R.107, Y.145, Y.171, Y.247, S.365, W.367 Ligands: XX6.5 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.107, A:Y.171, A:D.173, A:Y.247, A:S.365, A:S.365 Water bridges: A:Y.247

1 x XX6: 2-{[(2R)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL(Non-covalent)

XX6.5: 18 residues within 4Å: Chain A: N.141, A.143, Y.145, Y.171, D.173, Q.175, E.212, D.214, E.217, T.246, R.251, P.258, D.259, W.367, A.372, W.376, Y.381 Ligands: GOL.4 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:D.259, A:A.372, A:W.376, A:W.376, A:Y.381 Hydrogen bonds: A:N.141, A:Y.171, A:D.173, A:E.217 Water bridges: A:T.246 pi-Stacking: A:W.376, A:W.376 pi-Cation interactions: A:R.251, A:R.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fagerstrom, A. et al., A Study of the Chiral Recognition Mechanisms of Cellobiohydrolase Cel7A for Ligands Based on the Beta-Blocker Motif: Crystal Structures, Microcalorimetry and Computational Modelling of Cel7A-Inhibitor Complexes. To be Published

Release Date

2008-07-01

Peptides

EXOGLUCANASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EXOGLUCANASE 1

Related Entries With Identical Sequence