SMTL ID : 2v4m.2 (1 other biounit)

The isomerase domain of human glutamine-fructose-6-phosphate transaminase 1 (GFPT1) in complex with fructose 6-phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-dimer

Ligands

2 x F6R: FRUCTOSE -6-PHOSPHATE(Non-covalent)

F6R.1: 14 residues within 4Å: Chain A: C.69, G.70, T.71, S.72, S.116, Q.117, S.118, T.121, V.167, A.168, S.169, K.253, E.256 Chain B: H.272 16 PLIP interactions: 14 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:T.71, A:T.71, A:S.72, A:S.72, A:Q.117, A:S.118, A:T.121, A:T.121, A:T.121, A:S.169, A:K.253, A:K.253, B:H.272, B:H.272 Water bridges: A:S.169, A:S.169 F6R.3: 13 residues within 4Å: Chain A: H.272 Chain B: C.69, G.70, T.71, S.72, S.116, Q.117, S.118, T.121, A.168, S.169, K.253, E.256 14 PLIP interactions: 13 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:T.71, B:T.71, B:S.72, B:S.72, B:Q.117, B:S.118, B:T.121, B:T.121, B:S.169, B:K.253, A:H.272 Water bridges: B:T.124, B:S.169, B:S.169

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: R.38, L.48, G.49, G.50 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moche, M. et al., The Isomerase Domain of Human Gfpt1 in Complex with Fructose 6-Phosphate. To be Published

Release Date

2008-10-07

Peptides

GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 1

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