SMTL ID : 2v5f.1

Crystal structure of wild type peptide-binding domain of human type I collagen prolyl 4-hydroxylase.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

monomer

Ligands

1 x HIS- HIS- HIS- HIS- HIS- HIS: HEXA-HISTIDINE PEPTIDE(Non-covalent)

HIS-HIS-HIS-HIS-HIS-HIS.1: 10 residues within 4Å: Chain A: Y.16, T.17, A.19, Y.21, D.50, Y.51, Y.54, R.81, N.85, Y.88 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.16 Hydrogen bonds: A:Y.16, A:Y.16, A:Y.21, A:Y.54, A:Y.54, A:R.81 Water bridges: A:Q.58, A:R.81, A:R.81 pi-Stacking: A:Y.88 pi-Cation interactions: A:R.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pekkala, M. et al., Crystal Structure of Wild Type Peptide-Binding Domain of Human Type I Collagen Prolyl 4- Hydroxylase. To be Published

Release Date

2009-11-17

Peptides

PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1