SMTL ID : 2v72.1

The structure of the family 32 CBM from C. perfringens NanJ in complex with galactose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: S.31, D.34, N.36, T.39, A.137, E.138 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:S.31, A:N.36, A:T.39, A:A.137, A:E.138

1 x GAL: beta-D-galactopyranose(Non-covalent)

GAL.2: 5 residues within 4Å: Chain A: H.42, W.45, R.73, N.78, F.133 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.42, A:W.45, A:R.73, A:R.73, A:N.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boraston, A.B. et al., Carbohydrate Recognition by a Large Sialidase Toxin from Clostridium Perfringens. Biochemistry (2007)

Release Date

2007-08-21

Peptides

EXO-ALPHA-SIALIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EXO-ALPHA-SIALIDASE