SMTL ID : 2v8f.1

Mouse Profilin IIa in complex with a double repeat from the FH1 domain of mDia1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

hetero-2-1-mer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Y.25, R.105, G.107 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.107 Water bridges: A:R.105, A:R.105 Salt bridges: A:R.105 SO4.3: 5 residues within 4Å: Chain A: C.26, D.27, A.28, R.108 Chain C: P.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.27, A:A.28 Salt bridges: A:R.108 SO4.4: 4 residues within 4Å: Chain B: Y.25, R.105, G.107, R.136 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Y.25 Water bridges: B:Y.25, B:R.105, B:R.105, B:G.107 Salt bridges: B:R.105, B:R.136 SO4.7: 6 residues within 4Å: Chain B: C.26, D.27, A.28, W.32, R.108 Chain C: P.14 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.27, B:A.28 Water bridges: B:C.26, B:R.108 Salt bridges: B:R.108 SO4.8: 3 residues within 4Å: Chain B: Q.5, T.35, A.36 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:Q.5, B:Q.5, B:A.36 Water bridges: A:Q.5, A:Q.5, A:Q.5

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 3 residues within 4Å: Chain A: F.60, R.75, D.76 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.76, A:D.76

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain B: S.92, G.95, E.96, T.98 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.92, B:S.92 Water bridges: B:T.98, B:T.98

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.6: 5 residues within 4Å: Chain B: N.10, M.131, Y.134 Chain C: L.19, P.20 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:Y.134, B:Y.134, C:L.19, C:P.20 Hydrogen bonds: B:N.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kursula, P. et al., High-Resolution Structural Analysis of Mammalian Profilin 2A Complex Formation with Two Physiological Ligands: The Formin Homology 1 Domain of Mdia1 and the Proline-Rich Domain of Vasp. J.Mol.Biol. (2008)

Release Date

2007-12-18

Peptides

PROFILIN-2: AB
PROTEIN DIAPHANOUS HOMOLOG 1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

PROFILIN-2

PROTEIN DIAPHANOUS HOMOLOG 1

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