SMTL ID : 2v9e.2 (1 other biounit)

L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A- K248W-A273S)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.58 Å

Oligo State

homo-tetramer

Ligands

12 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.141, H.143, H.212 Ligands: ACT.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:H.141, A:H.143, A:H.212, ACT.4 ZN.2: 2 residues within 4Å: Chain A: H.50, Q.52 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.50 ZN.3: 2 residues within 4Å: Chain A: E.200, H.204 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.200, A:H.204 ZN.5: 4 residues within 4Å: Chain B: H.141, H.143, H.212 Ligands: ACT.8 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: B:H.141, B:H.143, B:H.212, ACT.8 ZN.6: 2 residues within 4Å: Chain B: H.50, Q.52 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.50 ZN.7: 2 residues within 4Å: Chain B: E.200, H.204 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:E.200, B:H.204 ZN.9: 4 residues within 4Å: Chain C: H.141, H.143, H.212 Ligands: ACT.12 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:H.141, C:H.143, C:H.212, ACT.12 ZN.10: 2 residues within 4Å: Chain C: H.50, Q.52 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:H.50 ZN.11: 2 residues within 4Å: Chain C: E.200, H.204 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:E.200, C:H.204 ZN.13: 4 residues within 4Å: Chain D: H.141, H.143, H.212 Ligands: ACT.16 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:H.141, D:H.143, D:H.212 ZN.14: 2 residues within 4Å: Chain D: H.50, Q.52 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:H.50 ZN.15: 2 residues within 4Å: Chain D: E.200, H.204 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:E.200, D:H.204

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 9 residues within 4Å: Chain A: N.29, G.30, G.31, N.32, H.141, H.143, H.212 Chain C: E.171 Ligands: ZN.1 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:G.31, A:N.32, C:E.171 Salt bridges: A:H.141, A:H.143, A:H.212 ACT.8: 9 residues within 4Å: Chain A: E.171 Chain B: N.29, G.30, G.31, N.32, H.141, H.143, H.212 Ligands: ZN.5 6 PLIP interactions: 1 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:E.171, B:G.31, B:N.32 Salt bridges: B:H.141, B:H.143, B:H.212 ACT.12: 9 residues within 4Å: Chain C: N.29, G.30, G.31, N.32, H.141, H.143, H.212 Chain D: E.171 Ligands: ZN.9 6 PLIP interactions: 5 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:G.31, C:N.32, D:E.171 Salt bridges: C:H.141, C:H.143, C:H.212 ACT.16: 9 residues within 4Å: Chain B: E.171 Chain D: N.29, G.30, G.31, N.32, H.141, H.143, H.212 Ligands: ZN.13 6 PLIP interactions: 5 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:G.31, D:N.32, B:E.171 Salt bridges: D:H.141, D:H.143, D:H.212

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grueninger, D. et al., Designed Protein-Protein Association. Science (2008)

Release Date

2008-01-15

Peptides

RHAMNULOSE-1-PHOSPHATE ALDOLASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

RHAMNULOSE-1-PHOSPHATE ALDOLASE

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