SMTL ID : 2v9i.2 (1 other biounit)

L-RHAMNULOSE-1-PHOSPHATE ALDOLASE FROM ESCHERICHIA COLI (MUTANT E192A- K248W-L274stop)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-tetramer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: K.23, D.229 Chain C: W.21, G.24, E.27 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:K.23 Water bridges: C:G.24, C:D.26 EDO.3: 5 residues within 4Å: Chain A: W.21, G.24, E.27 Chain B: K.23, D.229 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:K.23 Water bridges: A:G.24, A:D.26 EDO.5: 5 residues within 4Å: Chain C: K.23, D.229 Chain D: W.21, G.24, E.27 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain D Hydrogen bonds: C:K.23 Water bridges: D:G.24, D:D.26 EDO.7: 5 residues within 4Å: Chain B: W.21, G.24, E.27 Chain D: K.23, D.229 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D Water bridges: B:G.24, B:D.26 Hydrogen bonds: D:K.23

4 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.141, H.143, H.212 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.141, A:H.143, A:H.212, H2O.8 ZN.4: 3 residues within 4Å: Chain B: H.141, H.143, H.212 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.141, B:H.143, B:H.212, H2O.16 ZN.6: 3 residues within 4Å: Chain C: H.141, H.143, H.212 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.141, C:H.143, C:H.212, H2O.24 ZN.8: 3 residues within 4Å: Chain D: H.141, H.143, H.212 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.141, D:H.143, D:H.212, H2O.32

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grueninger, D. et al., Designed Protein-Protein Association. Science (2008)

Release Date

2008-01-15

Peptides

RHAMNULOSE-1-PHOSPHATE ALDOLASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

D
B

RHAMNULOSE-1-PHOSPHATE ALDOLASE

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