SMTL ID : 2v9k.1

Crystal structure of human PUS10, a novel pseudouridine synthase.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: R.448, Y.486, I.487, K.488 Ligands: EPE.6 Ligand excluded by PLIP CL.2: 5 residues within 4Å: Chain A: G.342, R.343, R.355, K.413 Ligands: EPE.6 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain A: N.386 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: S.146, V.147, K.184, K.188 Ligand excluded by PLIP

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 4 residues within 4Å: Chain A: C.22, C.25, C.110, C.113 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.22, A:C.25, A:C.110, A:C.113

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.6: 12 residues within 4Å: Chain A: R.343, E.344, D.345, V.348, Y.415, R.453, R.458, G.484, T.485, Y.486 Ligands: CL.1, CL.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.345, A:Y.486 Water bridges: A:R.448, A:R.448 Salt bridges: A:D.345, A:R.453, A:R.458 EPE.7: 4 residues within 4Å: Chain A: W.420, H.474, D.511, L.513 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.474 pi-Cation interactions: A:W.420

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.8: 5 residues within 4Å: Chain A: T.19, N.111, P.269, P.270, N.271 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.19, A:N.111 Water bridges: A:N.271

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mccleverty, C.J. et al., Crystal Structure of Human Pus10, a Novel Pseudouridine Synthase. J.Mol.Biol. (2007)

Release Date

2007-10-09

Peptides

UNCHARACTERIZED PROTEIN FLJ32312: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UNCHARACTERIZED PROTEIN FLJ32312